BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D03SP1|AL429726
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig374 1186 0.0
3x_Contig1250 425 e-118
>3x_Contig374
Length = 1960
Score = 1186 bits (598), Expect = 0.0
Identities = 612/614 (99%), Gaps = 2/614 (0%)
Strand = Plus / Minus
Query: 1 gatctcaattgatcttcggtcaatttgcttaatgggaatttgccctcattcaacctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gatctcaattgatcttcggtcaatttgcttaatgggaatttgccctcattcaacctctca 570
Query: 61 aagttacgtctatcaatctctatgcactcagcattatcatttaacttcgtaattaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagttacgtctatcaatctctatgcactcagcattatcatttaacttcgtaattaatctt 510
Query: 121 gtgcatccaaaaactaataaatcagagtcctccgaaatgatcccctggactaacccctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtgcatccaaaaactaataaatcagagtcctccgaaatgatcccctggactaacccctgt 450
Query: 181 ttttccaaatacaccatctgggcatctgcttcataaggtgcaacgacatacggtatcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttttccaaatacaccatctgggcatctgcttcataaggtgcaacgacatacggtatcgaa 390
Query: 241 ttcatttgcagatactcaatgacacatttagccatatccggggtgatgctaacgcatttt 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 389 ttcatttgcagatactcaatgacacatttagccatatccggggtgatg-taacgcatttt 331
Query: 301 tggaaataatcgtaagccaacctcctatctccagcttcgaacaatgcatgtgctttctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggaaataatcgtaagccaacctcctatctccagcttcgaacaatgcatgtgctttctcc 271
Query: 361 ctattctctttccgtttctctgccctcttcagctcagtctctttcttcacttgaatagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctattctctttccgtttctctgccctcttcagctcagtctctttcttcacttgaatagaa 211
Query: 421 tcaccatcgaatacaaagaatggagtaatcttgaaatgccttaacattgaaattctcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tcaccatcgaatacaaagaatggagtaatcttgaaatgccttaacattgaaattctcttg 151
Query: 481 atgaaaaattgtaaatatttgtcagtaggctggtccatggcaagttccatagcgcatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atgaaaaattgtaaatatttgtcagtaggctggtccatggcaagttccatagcgcatgag 91
Query: 541 tgtgctgacctatgtaaccatgcatacccgtcaattgccaacgtctcgccttgataa-cg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 90 tgtgctgacctatgtaaccatgcatacccgtcaattgccaacgtctcgccttgataagcg 31
Query: 600 agccaagctcacgg 613
||||||||||||||
Sbjct: 30 agccaagctcacgg 17
>3x_Contig1250
Length = 5563
Score = 425 bits (214), Expect = e-118
Identities = 218/220 (99%)
Strand = Plus / Plus
Query: 672 tagatagagttgtgaagcagatattgcttataggctttgtatccttgtttctaatagcgc 731
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tagatagagttctgaagcagatattgcttataggctttgtatccttgtttctaatagcgc 63
Query: 732 tgacgtcagtgagtggtatcaatgaggactccttcaattgcttcctctcttcaaatgtta 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgacgtcagtgagtggtatcaatgaggactccttcaattgcttcctctcttcaaatgtta 123
Query: 792 agagcttcgcatgatatgtaaatatactttgtggatctctcgaagratgttaacgcgatt 851
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 124 agagcttcgcatgatatgtaaatatactttgtggatctctcgaaggatgttaacgcgatt 183
Query: 852 tccgggtaatagcaaattcaacattctgacaactacttac 891
||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tccgggtaatagcaaattcaacattctgacaactacttac 223
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6104
Number of Sequences: 1807
Number of extensions: 6104
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)